System ConfigurationΒΆ

  • Output to wk dir: Set to output results to wk (working) directory defined below. BRANT will create new directory for each subject and copy necessary files to the new directory, then start processing.
  • Check Board: Open/Close CheckBoard.
  • Sync: Synchronize parameters of TR in slice timing and denoise.
  • Parallel Workers: The number of workers used during processing. e.g. when set to 2, BRANT will run 2 subjects in parallel. The processing speed depends on both CPU and Hard Drive speed, if there are a lot data IO with less computation task, set to more workers will slow down the entire process.