File NameΒΆ

Operation Name File/Folder Name
DICOM Convert brant_4D.nii
slice timing abrant_4D.nii
abrant_4D.mat
realign rabrant_4D.nii
meanabrant_4D.nii
rp_abrant_4D.txt
coregister wholebrain.nii
betStruchImg.nii
normalise wrabrant_4D.nii
denoise dGSRwrabrant_4D.nii
dnoGSRwrabrant_4D.nii
fdGSRwrabrant_4D.nii
fdnoGSRwrabrant_4D.nii
smooth s6fdGSRwrabrant_4D.nii
s6fdnoGSRwrabrant_4D.nii
Visual Check axial (folder)
coronal (folder)
ortho (folder)
sagital (folder)
Head Motion Est brant_headmotion_exclusions.txt
brant_headmotion_result.csv
Draw ROI brant_2_sphere_rois.nii/brant_2_cube_rois.nii
roi_info_sphere_2_rois.csv/roi_info_cube_2_rois.csv
ROI Calculation mean_ts(folder)
roi2roi_r_pearson_correlation (folder)
roi2roi_z_pearson_correlation (folder)
roi2wb_r_pearson_correlation (folder)
roi2wb_z_pearson_correlation (folder)
brant_roi_info.csv
roi_history.txt
T-Tests grp1_grp2_group_info.csv
group_info.mat
ttest2_diary.txt
ttest2_grp1_vs_grp2.mat
ttest2_grp1_vs_grp2_h_unc.txt
ttest2_grp1_vs_grp2_pval_left_unc.txt
ttest2_grp1_vs_grp2_pval_right_unc.txt
ttest2_grp1_vs_grp2_tval.txt
Network Calculation *_corr_z_network.mat
Network Statistics clustering_coeffecient_corr_ttest2_grp1_vs_grp2.png
clustering_coeffecient_spar_ttest2_grp1_vs_grp2.png
network_clustering_coeffecient.csv
network_clustering_coeffecient_ttest2_grp1_vs_grp2_stat.csv
readme.txt